Contribute to DrosOmics
If you want DrosOmics to incorporate your own data (e.g., de novo genome assemblies, functional -omics datasets), please contact us: josefa.gonzalez@csic.es. The following table indicates the preferred format for each data type:| Data | Format |
|---|---|
| Genome assembly from long-read sequencing* | FASTA file |
| Genome annotations (transposable elements, genes, etc.) | GFF3 file |
| RNA-seq data | BAM file Reads must be aligned to a genome assembly available in DrosOmics, or to a new provided one. |
| ChIP-seq data | bigWig file of the fold-change signal over control (MACS2 output) bed file of the called peaks (MACS2 output) Reads must be aligned to a genome assembly available in DrosOmics, or to a new provided one. |
| Other -omics data | Contact us for new data types not included in DrosOmics |
*For genome assemblies obtained from short-read sequencing technologies, we encourage sending them to DEST browser (https://dest.bio; Kapun et al. 2021) which is maintained by the Barbadilla lab.
DrosOmics will be updated every six months to add new data generated by the González lab or provided by the community.
Current release: DrosOmics 1.0.